Cloud environments overview
What are cloud environments and how do you use them?
Tag: Notebooks
Cloud environment operations
Operations that can be performed on cloud environments through the Verily Workbench web UI
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Get started with Nextflow on Verily Workbench
How to use Nextflow with the Workbench CLI
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Access, browse, save, and share data
How to access, browse, save, and share workspace data in Verily Workbench
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Start a workspace in Verily Workbench
Quickstart guide to workspaces in the web UI
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Workbench CLI commands
Detailed explanations about the Workbench CLI commands and their options
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Git integrations with cloud environments
Working with Git and GitHub
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Git repositories in notebooks
Examples related to using Git repositories in your notebook environments with the Workbench CLI
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Use cloud environments for analysis
How to use cloud environments for analysis
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Query OMOP data in BigQuery using the CMS SynPuf dataset
Examples of querying OMOP data in BigQuery using the CMS SynPuf dataset
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Use the Workbench CLI from a container
Building a custom container and using it to run Workbench CLI commands
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Create container images in a workspace
How to use Cloud Build or Docker to create container images from within a workspace
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Use Dataproc (Spark) and Hail on Verily Workbench
How to use Dataproc (managed Spark) environments and run Hail on Verily Workbench
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Install and run Quarto on Verily Workbench
How to install and run Quarto in a cloud environment
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Run AlphaFold from a notebook
Run AlphaFold via a notebook example