Workflows

Discover what workflows are and how you can run them in Verily Workbench

Workflows overview

What are workflows and how do you use them?

Workflows in Verily Workbench: Cromwell, dsub, and Nextflow

Create a workflow using Cromwell, dsub, or Nextflow

Use the Cromwell engine to run WDL workflows

Step-by-step instructions for running WDL workflows with Cromwell

Create batch jobs with the Workbench CLI

Instructions for creating and running batch jobs via the Workbench CLI

Get started with Nextflow on Verily Workbench

Step-by-step instructions for running a Nextflow pipeline

Get started with dsub on Verily Workbench

How to run a dsub job in Workbench

Run GVS on Verily Workbench

Step-by-step instructions for running a GVS workflow

Last Modified: 16 July 2024